Re: No module named pymedtermino2 and destroy RDF triples

Posted by Jiba on May 14, 2019; 5:38pm
URL: http://owlready.306.s1.nabble.com/No-module-named-pymedtermino2-and-destroy-RDF-triples-tp1028p1050.html

Hi,

It seems that the extraction process was performed, but nothing was extracted...

Do you see the following lines in the terminal? It should display the name of the files parsed (MRRANK.RRF, etc).


Importing UMLS from /home/jiba/telechargements/base_med/2018AB-full/2018AB/META/...
  Parsing MRRANK.RRF as MRRANK...
  Parsing MRCONSO.RRF as MRCONSO...
  Parsing MRDEF.RRF as MRDEF...
  Parsing MRREL.RRF as MRREL...
  Parsing MRSAT.RRF as MRSAT...
Breaking ORIG cycles...
    SNOMEDCT_US : 0 cycles found:
    ICD10 : 0 cycles found:
    SRC : 0 cycles found:
Finalizing only properties and restrictions...
Finalizing CUI - ORIG mapping...
Indexing...
FTS Indexing...