Hi again Jiba,
I might have detected another bug concerning annotation properties which might be related to my recent bug report (and blank nodes):
http://owlready.8326.n8.nabble.com/Bug-fix-request-Querying-annotations-in-Owlready2-0-19-and-higher-td1330.html. This time, I would like to delete annotated properties via SPARQL Update queries.
The ontology is the same as last time:
ONTOLOGY
<?xml version="1.0"?>
<rdf:RDF xmlns="
http://www.example/or2_swrl#" xml:base="
http://www.example/or2_swrl" xmlns:owl="
http://www.w3.org/2002/07/owl#" xmlns:rdf="
http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:xml="
http://www.w3.org/XML/1998/namespace" xmlns:xsd="
http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="
http://www.w3.org/2000/01/rdf-schema#" xmlns:swrl="
http://www.w3.org/2003/11/swrl#"> <owl:Ontology rdf:about="
http://www.example/or2_swrl"/>
<owl:ObjectProperty rdf:about="
http://www.example/or2_swrl#op1"/>
<owl:ObjectProperty rdf:about="
http://www.example/or2_swrl#op2"/>
<owl:Class rdf:about="
http://www.example/or2_swrl#A"/>
<owl:NamedIndividual rdf:about="
http://www.example/or2_swrl#individual1"> <rdf:type rdf:resource="
http://www.example/or2_swrl#A"/> <op1 rdf:resource="
http://www.example/or2_swrl#individual2"/> </owl:NamedIndividual>
<owl:Axiom>
<owl:annotatedSource rdf:resource="
http://www.example/or2_swrl#individual1"/> <owl:annotatedProperty rdf:resource="
http://www.example/or2_swrl#op1"/> <owl:annotatedTarget rdf:resource="
http://www.example/or2_swrl#individual2"/> <rdfs:comment>test</rdfs:comment>
</owl:Axiom>
<owl:NamedIndividual rdf:about="
http://www.example/or2_swrl#individual2"> <rdf:type rdf:resource="
http://www.example/or2_swrl#A"/> </owl:NamedIndividual>
</rdf:RDF>
CODE
ontology = or2.get_ontology(file).load()
graph = or2.default_world.as_rdflib_graph()
graph.bind("owl", "
http://www.w3.org/2002/07/owl#")
graph.bind("rdfs", "
http://www.w3.org/2000/01/rdf-schema#")
graph.bind("onto", ontology.base_iri)
query = """DELETE { ?annotation ?p ?o . onto:individual1 onto:op1 onto:individual2 . }
WHERE {
?annotation owl:annotatedSource onto:individual1 .
?annotation owl:annotatedProperty onto:op1 .
?annotation owl:annotatedTarget onto:individual2 .
?annotation ?p ?o .
}"""
graph.update(delete_query)
Using Owlready2 0.18, the targeted relation is correctly deleted. Using the development version produces the following error:
Traceback (most recent call last):
File "***.py", line 58, in <module>
graph.update(delete_query)
File "/home/maris/PycharmProjects/ontology-interface/venv/lib/python3.6/site-packages/rdflib/graph.py", line 1112, in update
return processor.update(update_object, initBindings, initNs, **kwargs)
File "/home/maris/PycharmProjects/ontology-interface/venv/lib/python3.6/site-packages/rdflib/plugins/sparql/processor.py", line 56, in update
return evalUpdate(self.graph, strOrQuery, initBindings)
File "/home/maris/PycharmProjects/ontology-interface/venv/lib/python3.6/site-packages/rdflib/plugins/sparql/update.py", line 305, in evalUpdate
evalModify(ctx, u)
File "/home/maris/PycharmProjects/ontology-interface/venv/lib/python3.6/site-packages/rdflib/plugins/sparql/update.py", line 173, in evalModify
dg -= _fillTemplate(u.delete.triples, c)
File "/home/maris/PycharmProjects/ontology-interface/venv/lib/python3.6/site-packages/rdflib/graph.py", line 568, in __isub__
self.remove(triple)
File "/home/maris/PycharmProjects/ontology-interface/venv/lib/python3.6/site-packages/rdflib/graph.py", line 415, in remove
self.__store.remove((s, p, o), context=self)
File "/home/maris/PycharmProjects/ontology-interface/venv/lib/python3.6/site-packages/owlready2/rdflib_store.py", line 143, in remove
elif (s < 0) and (s in triplelite.ontology._bnodes): sub = triplelite.ontology._bnodes[s]
NameError: name 'triplelite' is not defined
Thanks again for your help!
Best,
Marie
Locked
